Matrix-Variate Discriminative Analysis, Integrative Hypothesis Testing, and Geno-Pheno A5 Analyzer

نویسنده

  • Lei Xu
چکیده

A general perspective is provided on both on hypothesis testing and discriminative analyses, by which matrix-variate discriminative analyses are proposed based on the matrix normal distribution, featured by a bi-linear extension of Fisher linear discriminant analysis and a further extension to binary variables. Moreover, a general formulation is proposed for integrative hypothesis testing and five typical categories are summarized. Furthermore, major techniques for variable selection are briefly elaborated. Finally, taking analyses of gene expression and exome sequencing as examples, we further propose a general procedure called Geno-Pheno A5 Analyzer for integrative discriminant analysis.

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

منابع مشابه

Matrix-Variate Beta Generator - Developments and Application

Matrix-variate beta distributions are applied in different fields of hypothesis testing, multivariate correlation analysis, zero regression, canonical correlation analysis and etc. A methodology is proposed to generate matrix-variate beta generator distributions by combining the matrix-variate beta kernel with an unknown function of the trace operator. Several statistical characteristics, exten...

متن کامل

Integrative Hypothesis Test and A5 Formulation: Sample Pairing Delta, Case Control Study, and Boundary Based Statistics

This paper continues the previous preliminary study on integrative hypothesis test (IHT) (Xu, LNCS7751, 2013). First, the coverage of IHT studies are elaborated from four aspects. Then, the previous preliminary A5 formulation for IHT is developed into one that integrates multiple individual tasks of discriminative analysis to improve hypothesis test with enhanced reliability. Next, a sample-pai...

متن کامل

Matrix-Variate Dirichlet Process Priors with Applications

In this paper we propose a matrix-variate Dirichlet process (MATDP) for modeling the joint prior of a set of random matrices. Our approach is able to share statistical strength among regression coe cient matrices due to the clustering property of the Dirichlet process. Moreover, since the base probability measure is de ned as a matrix-variate distribution, the dependence among the elements of e...

متن کامل

A New Genetic Coding for Job Shop Scheduling Problem Considering Geno Type and Pheno Type

Job shop scheduling problem is one of the most important problems in the combinatorial optimization problems, and it is applied to various fields about engineering. Many works have been reported for this problem using Genetic Algorithm (GA). The GA is one of the most powerful optimization methods based on the mechanics of natural evolution. In this paper, we propose a new genetic coding for the...

متن کامل

Integrated simultaneous analysis of different biomedical data types with exact weighted bi-cluster editing

The explosion of biological data has largely influenced the focus of today's biology research. Integrating and analysing large quantity of data to provide meaningful insights has become the main challenge to biologists and bioinformaticians. One major problem is the combined data analysis of data from different types, such as phenotypes and genotypes. This data is modelled as bi-partite graphs ...

متن کامل

ذخیره در منابع من


  با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

عنوان ژورنال:

دوره   شماره 

صفحات  -

تاریخ انتشار 2012